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CB2030

Here we store material for the Data Analysis part of the CB2030, Systems Biology course.

This project is maintained by statisticalbiotechnology

Schedule 2026

Code Day Date Time Location ID The topic of the Convocation
L1 Mon 26/10 13-15 FR4 All Introduction
C0 Wed 28/10 08-12 Orange, Grön, Brun, Vit All Software and Notebooks
L2 Thu 29/10 15-17 M2 LK Regression Models
L3 Fri 30/10 13-15 FD5 LK Classification Models; Validation
             
L4 Wed 04/11 08-10 K1 LK SVMs and Neural Networks
L5 Fri 06/11 15-17 D2 LK Clustering
             
L6 Wed 11/11 10-12 FD5 LK Principal Component Analysis
L7 Thu 12/11 15-17 D2 LK Hypothesis Testing
             
L8 Tue 17/11 13-15 FD5 LK Multiple Testing
C1 Wed 18/11 13-17 Gul, Spelhallen, Sporthallen LK Hypothesis Testing
L9 Thu 19/11 10-12 K1 SK Single Cell 1
C2 Thu 19/11 13-17 Grön, Brun, Grå, Karmosin LK Machine Learning
L10 Fri 20/11 10-12 D2 SK Single Cell 2
             
L11 Tue 24/11 10-12 M1 TL Systems genetics and genetic architecture
L12 Wed 25/11 13-15 K2 TL Molecular effects of genetic variation : molQTLs
L13 Thu 26/11 13-15 D2 TL Molecular effects of genetic variation : CRISPR and deep learning models
C3 Fri 27/11 08-12 M1 SK TBD
             
L14 Wed 02/12 10-12 FD5 SK Single Cell 3
L15 Thu 03/12 15-17 K1 SK Single Cell 4
L16 Fri 04/12 10-12 M2 SK Single Cell 5
             
C4 Mon 07/12 13-17 Gul, Spelhallen, Sporthallen SK TBD
L17 Tue 08/12 10-12 FD5 LK Pathway Analysis
L18 Thu 10/12 10-12 FD5 LK Flux Balance Analysis
L19 Fri 11/12 13-15 FD5 All Q&A
             
Exam Mon 11/01 08-12 FR4 (Oskar Kleins auditorium) All Systems Biology

We used the following codes:

ID Name
LK Lukas Käll
TL Tuuli Lappalainen
SK Simon Koplev

Teaching assistants (lab-handledare): Krzysztof Jurdziński, Yuqi Zheng, Ulysse Castet, Konstantinos Antonopoulos, Anna Hensel, Amin Saeidi Kelishami, Cassandra Wivegg, Andrei Tertienko